When I'm looking to lower salinity I'll fill up my ATO and remove cups of pints of water throughout the course of the day. This is super slow going on a large frag system but it's worked for me. Typically two pints at a time for an 85g system. Slow and steady. It can be done quicker though if needed. I do everything slow not because I'm patient and methodical; mostly because I'm lazy!
Side note: before I make any salinity changes I calibrate what I'm using to measure salinity in case something is out of whack.